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Microbial communities, and their ecological importance, have been investigated in several habitats. However, so far, most studies could not describe the closest microbial interactions and their functionalities. This study investigates the co-occurring interactions between fungi and bacteria in plant rhizoplanes and their potential functions. The partnerships were obtained using fungal-highway columns with four plant-based media. The fungi and associated microbiomes isolated from the columns were identified by sequencing the ITS (fungi) and 16S rRNA genes (bacteria). Statistical analyses including Exploratory Graph and Network Analysis were used to visualize the presence of underlying clusters in the microbial communities and evaluate the metabolic functions associated with the fungal microbiome (PICRUSt2). Our findings characterize the presence of both unique and complex bacterial communities associated with different fungi. The results showed that Bacillus was associated as exo-bacteria in 80 % of the fungi but occurred as putative endo-bacteria in 15 %. A shared core of putative endo-bacterial genera, potentially involved in the nitrogen cycle was found in 80 % of the isolated fungi. The comparison of potential metabolic functions of the putative endo- and exo-communities highlighted the potential essential factors to establish an endosymbiotic relationship, such as the loss of pathways associated with metabolites obtained from the host while maintaining pathways responsible for bacterial survival within the hypha.more » « less
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Shakiba, Sheyda; Astete, Carlos E.; Paudel, Sachin; Sabliov, Cristina M.; Rodrigues, Debora F.; Louie, Stacey M. (, Environmental Science: Nano)null (Ed.)Polymeric nanoparticles represent one major class of nanomaterials that has been proposed to improve the sustainability of agricultural operations by delivering organic agrochemicals such as pesticides more efficiently. Polymeric nanoparticles can improve efficiency through improved targeting and uptake, slow release, and lower losses of the chemicals, while also conferring the benefits of biodegradability and biocompatibility. This review provides a tutorial to environmental nanotechnology researchers interested in initiating research on the development and application of polymeric nanocarriers for delivery of agrochemicals, including pesticides and growth promoters for crops and antibiotics for livestock. In particular, this review covers the wider suite of methods that will be required beyond those typically used for inorganic metal or metal oxide nanoparticles, including synthesis of custom polymeric nanocarriers and characterization and tuning of agrochemical loading and release profiles. Benefits of polymeric nanocarriers are then discussed in terms of the physicochemical properties and fate and transport behaviors that contribute to higher efficiency and lesser environmental impacts compared to traditional (non-nano) formulations. Finally, opportunities for environmental nanotechnology researchers to collaborate with material scientists, microbiologists, and agricultural scientists to optimize the development of polymeric nanocarriers for agriculture are discussed.more » « less
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